CDS

Accession Number TCMCG051C21890
gbkey CDS
Protein Id XP_002309557.2
Location complement(join(25037058..25037183,25037336..25037545,25037625..25037739,25037991..25038331,25038624..25040391,25040629..25040757,25040903..25041006,25041134..25041228,25042585..25042642,25043058..25043112,25043191..25043273))
Gene LOC7471543
GeneID 7471543
Organism Populus trichocarpa

Protein

Length 1027aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002309521.3
Definition transcription factor MYB3R-1 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description Myb-related protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K09420        [VIEW IN KEGG]
ko:K09422        [VIEW IN KEGG]
ko:K21769        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04151        [VIEW IN KEGG]
ko04218        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
map04151        [VIEW IN KEGG]
map04218        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
GOs GO:0000981        [VIEW IN EMBL-EBI]
GO:0000988        [VIEW IN EMBL-EBI]
GO:0000989        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001076        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0001134        [VIEW IN EMBL-EBI]
GO:0001135        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006275        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008285        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009608        [VIEW IN EMBL-EBI]
GO:0009610        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009623        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009751        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032465        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032875        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090329        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901181        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001023        [VIEW IN EMBL-EBI]
GO:2001024        [VIEW IN EMBL-EBI]
GO:2001038        [VIEW IN EMBL-EBI]
GO:2001039        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAAGTAGTGACAGTTTAATTTCTGCTCCTGTGGATGGGCTTGTTAGTGAGGGGGTTCCGAGACCCAAGCTTCTTCATGGGAGGACTAGTGGCCCTGCAAGGCGTTCCACAAAGGGGCAATGGACAGCTGAAGAGGATGAGATTCTGCGCAAGGCTGTTCAGCGTTTCAAAGGAAAGAACTGGAAAAAAATTGCTGAGTGTTTCAAGGACAGGACTGATGTACAATGTCTGCATAGGTGGCAGAAGGTCTTGAATCCTGAACTTGTTAAAGGTCCATGGTCAAAGGAGGAGGATGAAATAATAATTGAATTGGTGAACAAATATGGACCAAAGAAGTGGTCCACAATCGCACAGCATTTGCCTGGACGTATTGGAAAGCAGTGCCGGGAAAGGTGGCATAATCATCTTAATCCTTCAATAAACAAAGAGGCATGGACTCAGCAAGAGGAGCTGGCCTTGATTCGTGCACATCAGATTTATGGGAACAGATGGGCAGAGCTGACAAAGTTCTTGCCTGGAAGGACAGACAATGCCATAAAAAATCACTGGAACAGTTCTGTAAAGAAGAAACTGGATTCTTATTTGGCATCAGGTCTGTTAGAACAGTTCCAAGCCTTTCCTCTTGTTGGACATCAAACTCTACCCATGTCCTCGTCTTCCTCAAGGCTGCACTGTTCTGGAGATGATAATGCTCAGAGAGGTGGTGCAGAAGCTGAAGATATATCAGAATGCAGTCAAGAGTCAACTATTGGTGGTTGCTCACAGTCTGCGAGTGACCTGGGTAATGCAGTTTTTCATACAAGAGAAGAATTTCAGTTAGCTGAAGAATCTGGTCTCAGAAAGGAGCAAAGCTCCAGTCCAGCATCTTGTTCAGAACAATATTACATCCCTGAAATGCCTTGTGAATTGGGTGGCTCTTCCAATTTTCTCCAGCAAAATTTCTCTCATAACACTCTGACTTCCATGAGCAGTGATTATCAATTTGAATTACAGGAGCTACCTAACGTTTCCTCCCTAGAACTAAGGCAGGAATCATCAGGGTTGCCAACTCATTGCATAACTGCTAATGAAAGCCATGAACTGGTGAATGTTCCATTTCAAACTTCCATTGGCCTGAGTGCTCCTGCTTCCATGGGAAATATCACTGCAAGTTCTGTGCAATCAGACCAGATATTCATATCTGATGATGAATGTTGCAGGATTCTATTTTCAGAGGCAGCAAATGGTGGAATTTTTTCCTCTGAAAGTATTACAAAAGACTCGAGTGTGGTTGACTTAGGTGGTGGCATGGATTCTTCACTTCCTCAATCATCAAGCACCCAGATATCTGAAACAGAGAGAAGTGCTTCACAGTCATATTGTCCTCCGAGGTCTGCTGTTTTGGGAGCTTCATGCAGTCAATCATTTCTATCTGGTCCTTTACTATATTCTGCTGACAACAGTACACCACTTGTATATGATAGGGAACCCGATCAGTTAATGGTCCAATCATTCGGAACTCATGAACAACAGTTTATTACAACCGTACATGACAGCTTTATCTATACCAATGATGCCATCAACTCCTCTTGTGATGATGGTACAGGCAACACAGAGCTGCAAGAGCAACCATATTTGAAGGAACTGTCAAAGCTAGTGCCCGTGAATGCTTTCCCTTCTGGTTCAGATACCATATCATCTTGTCCTGCAGATGAGCAACCAAATGTGCATGCAGGGGGTCTTTGCTATGAACCTCCTCGTTTCCCATGCTTGGATATACCTTTTCTCAGTTGTGATCTCATACAATCTGGAAGTGATATGCAACAAGAGTATAGTCCTCTTGGTATCCGCCAACTAATGATGTCTTCCATGAATTGCATTACTCCATTTAGGTTATGGGATTCACCATCTCGGGATGGTAGCCCTGATGCTGTTCTGAAAAGTGCTGCCAAGACTTTCACAGGTACACCATCCATCCTGAAGAAACGAAACCGTGATTTATTGTCACCCTTGTCAGAGAGAAGAGGTGACAAAAAGCTTGAGATTGACATGGCATCCAATTTGAGCAAAGATTTTTCACGTTTGGATGTTATGTTTGACGAGAGTGAGACTCGCAACAGATCATCTCTGCTGTCTCCATCGTCCGATCAAGAAAAGAACCATGAATCCTCAGGTGAAGATAAAGAAAATTTGGACCCTGCTCGTGAAGGTGCAGAAGAAAATACTGGTAATTCCGAGGACAATGTAAAGCAAGGGGTAGGTGATAGTGATGCAAGGTCCAAGGCTCATCCTGATGCTGGTGCTCAAACTGTGAAACAGTCTTCTGAGGTCCCTGTTGAAGAAAACTCCGATGATCTGTTATTTTCTCCTAATCAACTTGGTTTTAAGGCAGACAGAACATTTGGTCCTAGCGCTAGAACTCCCAGGAATTTTTACCGTAAAATTTTGAGCACTTTATCAGAGCAAGCCAGTGCTTCAGAATCATCGTCTGGAAATCCATGCATAATCATTAGTCCTACTGTTTGCATGGAGAAGAATCATGGAAGTCACATAGTTGAAAGCACATCAGCACAACCTATTCCTTCATCAGCACCCTCAGAGAATATGCCTGATAATTCTGGGAACAGTGCTGGCACTGAAAATTTTGGCATATTTGGTGATACTCCTTTCAAAAGGAGTTTTGAATCCCCTTCGGCATGGAAGTCGCCTTGGTTCATTAATTCCTTTGTGCCAGGCCCAAGGATTGATACAGAAATATCCATTGAGGATATTGGTTATTTTATGAGCCCCGGGGACAGAAGTTATGATGCCATTGCATTAATGAAGCAGTTAAGTGAGCACACTGCCCCTGCTTATGCTGATGCCTTGGAGGTTATGGGTAAAGACACTCCGGAGTCCATATTAAAAGAAAGGAGGCGCTCCAATGATCCCGATGGTGACATAGAGAATTGCTCCCATTTAGTTTCAAATGTTTCGACCGAATGCCGGACCCTTGACTTTAGTGAATGTGGAACACCTGGGAAGAAAACAGAAAATGGGAAATCTTCAACAGCCATAAGCTTTTCAAGTCCCTCTTCGTATCTGCTGAAGAGTTGCAGATAG
Protein:  
MESSDSLISAPVDGLVSEGVPRPKLLHGRTSGPARRSTKGQWTAEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIELVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQQEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLEQFQAFPLVGHQTLPMSSSSSRLHCSGDDNAQRGGAEAEDISECSQESTIGGCSQSASDLGNAVFHTREEFQLAEESGLRKEQSSSPASCSEQYYIPEMPCELGGSSNFLQQNFSHNTLTSMSSDYQFELQELPNVSSLELRQESSGLPTHCITANESHELVNVPFQTSIGLSAPASMGNITASSVQSDQIFISDDECCRILFSEAANGGIFSSESITKDSSVVDLGGGMDSSLPQSSSTQISETERSASQSYCPPRSAVLGASCSQSFLSGPLLYSADNSTPLVYDREPDQLMVQSFGTHEQQFITTVHDSFIYTNDAINSSCDDGTGNTELQEQPYLKELSKLVPVNAFPSGSDTISSCPADEQPNVHAGGLCYEPPRFPCLDIPFLSCDLIQSGSDMQQEYSPLGIRQLMMSSMNCITPFRLWDSPSRDGSPDAVLKSAAKTFTGTPSILKKRNRDLLSPLSERRGDKKLEIDMASNLSKDFSRLDVMFDESETRNRSSLLSPSSDQEKNHESSGEDKENLDPAREGAEENTGNSEDNVKQGVGDSDARSKAHPDAGAQTVKQSSEVPVEENSDDLLFSPNQLGFKADRTFGPSARTPRNFYRKILSTLSEQASASESSSGNPCIIISPTVCMEKNHGSHIVESTSAQPIPSSAPSENMPDNSGNSAGTENFGIFGDTPFKRSFESPSAWKSPWFINSFVPGPRIDTEISIEDIGYFMSPGDRSYDAIALMKQLSEHTAPAYADALEVMGKDTPESILKERRRSNDPDGDIENCSHLVSNVSTECRTLDFSECGTPGKKTENGKSSTAISFSSPSSYLLKSCR